Banner

Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs12588108 chr14:74332478 C/T LIN52 chr14:74551499-74667938:+ 0.55 5.5 1.17E-6 Box Plot
ACC rs12589842 chr14:74347303 A/C LIN52 chr14:74551499-74667938:+ 0.56 5.63 7.47E-7 Box Plot
ACC rs12616041 chr2:61379844 G/A C2orf74 chr2:61372203-61391964:+ 0.64 6.39 4.64E-8 Box Plot
ACC rs12619780 chr2:99707307 C/T TSGA10 chr2:99613724-99771427:- 0.54 5.25 2.85E-6 Box Plot
ACC rs12621007 chr2:99791946 G/C TSGA10 chr2:99613724-99771427:- 0.56 5.45 1.39E-6 Box Plot
ACC rs12625404 chr20:44388291 C/T WFDC3 chr20:44376583-44420571:- 0.88 6.24 7.92E-8 Box Plot
ACC rs12625621 chr20:44440350 A/G WFDC3 chr20:44376583-44420571:- 0.86 6 1.93E-7 Box Plot
ACC rs12637699 chr3:46628443 C/T TDGF1 chr3:46616024-46623953:+ 0.72 6.33 5.81E-8 Box Plot
ACC rs12642343 chr4:141797576 C/G IL15 chr4:142557752-142655140:+ 0.87 5.25 2.89E-6 Box Plot
ACC rs12647543 chr4:7283617 A/G MRFAP1 chr4:6641818-6644472:+ 0.86 5.21 3.24E-6 Box Plot
ACC rs12679261 chr8:71844649 A/G XKR9 chr8:71581600-71702606:+ 0.68 7.07 3.86E-9 Box Plot
ACC rs12680103 chr8:71678484 C/T XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs12680166 chr8:71678638 G/C XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs12680988 chr8:71695890 T/G XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs12716486 chr5:96307636 A/G ERAP2 chr5:96211643-96255420:+ 0.82 8.52 1.97E-11 Box Plot